Reference

Data Set Data sets included in the hakaisalmon package
survey_data	Site, date, and other metadata associated with a survey
seine_data	Time, location, and catch effort of sets
site_activity	Fish surface activty observed during survey transects
bycatch_mort	Species bycatch and mortalities from sets
package_data	Inventory and other metadata associated with packages of fish caught from seines
fish_field_data	Biological measurements and metadata associated with fish caught in the field
fish_lab_data	Biological measurements and metadata associated with fish dissected in the lab
sealice_field	Enumeration of sea lice found on fish in the field
sealice_lab_motiles	Enumeration of sea lice found on fish in the lab
sealice_lab_finescale	Identification of sea lice collected from fish in the lab in 2015 from lice collection protocol *lab_fine_2015*
ysi	Temperature and salinity data
zoop_tows	Zooplankton tow metadata
stock_id	Probable genetic stocks associated a fish
Sample Inventory Data Data files that contain sample location, processing state, and other sample metadata
sample_container_inventory	Location information for all sample storage containers
Functions Custom functions for summarizing and analyzing
onAttach()	On attach message
mutate_cond()	A conditional mutate function that allows you to mutate a variable based on another
log_cumul_abund()	Predict the cumulative proportion of catch for the purposes of estimating annual migration timing using a logistic growth equation
lump_fraser_sockeye_stocks()	Lump Fraser River sockeye stocks produced by CBayes at PBS, based on regions according to Chrys Neville
Report Templates Standard report .Rmd templates
pdf_report_template	An R Markdown .pdf report template
html_report_template	An R Markdown .html report template